About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI7997218.1
CAI7997217.1
CAI7997219.1
CAI7997220.1
CAI7997221.1
CAI7997222.1SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE
CAI7997223.1PHOSPHOENOLPYRUVATE CARBOXYLASE
CAI7997224.1METHYLMALONYL-COA EPIMERASE
CAI7997225.1N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED
CAI7997226.1METHYLMALONYL-COA EPIMERASE
CAI7997227.1DUDULIN-RELATED
CAI7997228.1
CAI7997229.1
CAI7997230.1
CAI7997231.1
CAI7997232.1
CAI7997233.1
CAI7997234.1
CAI7997235.1
CAI7997236.1PRESEQUENCE PROTEASE
CAI7997237.1PRESEQUENCE PROTEASE
CAI7997238.1PRESEQUENCE PROTEASE
CAI7997253.1
CAI7997248.1
CAI7997251.1
CAI7997249.1
CAI7997247.1
CAI7997246.1
CAI7997250.1
CAI7997252.1
CAI7997245.1
CAI7997244.1
CAI7997243.1
CAI7997242.1
CAI7997240.1
CAI7997241.1
CAI7997239.1
CAI7997255.1
CAI7997256.1
CAI7997254.1
CAI7997257.1
CAI7997258.1
CAI7997259.1WD40 REPEAT PROTEINPRL1/PRL2-RELATED
CAI7997260.1WD40 REPEAT PROTEINPRL1/PRL2-RELATED
CAI7997261.1WD40 REPEAT PROTEINPRL1/PRL2-RELATED
CAI7997262.1WD40 REPEAT PROTEINPRL1/PRL2-RELATED
CAI7997264.1
CAI7997263.1
CAI7997266.1ATAXIN 7 RELATED
CAI7997265.1ATAXIN 7 RELATED
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