Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7997168.1 | CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 |
| CAI7997169.1 | CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 |
| CAI7997167.1 | |
| CAI7997170.1 | RIBOSOMAL PROTEIN L2 |
| CAI7997171.1 | UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 |
| CAI7997176.1 | URIDINE KINASE |
| CAI7997177.1 | URIDINE KINASE |
| CAI7997178.1 | URIDINE KINASE |
| CAI7997175.1 | URIDINE KINASE |
| CAI7997174.1 | URIDINE KINASE |
| CAI7997173.1 | |
| CAI7997172.1 | |
| CAI7997179.1 | URIDINE KINASE |
| CAI7997180.1 | URIDINE KINASE |
| CAI7997181.1 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
| CAI7997183.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
| CAI7997182.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1 |
| CAI7997185.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| CAI7997184.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| CAI7997186.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| CAI7997187.1 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| CAI7997188.1 | APYRASE |
| CAI7997189.1 | CYTOKINE RECEPTOR |
| CAI7997190.1 | |
| CAI7997191.1 | ELONGATION FACTOR G, MITOCHONDRIAL |
| CAI7997194.1 | ELONGATION FACTOR G, MITOCHONDRIAL |
| CAI7997195.1 | ELONGATION FACTOR G, MITOCHONDRIAL |
| CAI7997193.1 | ELONGATION FACTOR G, MITOCHONDRIAL |
| CAI7997192.1 | ELONGATION FACTOR G, MITOCHONDRIAL |
| CAI7997196.1 | ELONGATION FACTOR G, MITOCHONDRIAL |
| CAI7997197.1 | |
| CAI7997198.1 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| CAI7997199.1 | |
| CAI7997200.1 | |
| CAI7997201.1 | |
| CAI7997202.1 | AMMONIUM TRANSPORTER |
| CAI7997205.1 | AMMONIUM TRANSPORTER |
| CAI7997206.1 | AMMONIUM TRANSPORTER |
| CAI7997204.1 | AMMONIUM TRANSPORTER |
| CAI7997203.1 | AMMONIUM TRANSPORTER |
| CAI7997207.1 | AMMONIUM TRANSPORTER |
| CAI7997208.1 | |
| CAI7997213.1 | |
| CAI7997211.1 | |
| CAI7997210.1 | |
| CAI7997209.1 | |
| CAI7997212.1 | ZGC:172139 |
| CAI7997214.1 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| CAI7997216.1 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| CAI7997215.1 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
