Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7997374.1 | AMINOTRANSFERASE |
| CAI7997370.1 | AMINOTRANSFERASE |
| CAI7997376.1 | AMINOTRANSFERASE |
| CAI7997368.1 | AMINOTRANSFERASE |
| CAI7997372.1 | AMINOTRANSFERASE |
| CAI7997366.1 | AMINOTRANSFERASE |
| CAI7997378.1 | AMINOTRANSFERASE |
| CAI7997380.1 | LYSYL-TRNA SYNTHETASE |
| CAI7997382.1 | LYSYL-TRNA SYNTHETASE |
| CAI7997384.1 | LYSYL-TRNA SYNTHETASE |
| CAI7997388.1 | |
| CAI7997392.1 | |
| CAI7997390.1 | |
| CAI7997394.1 | |
| CAI7997396.1 | |
| CAI7997398.1 | |
| CAI7997402.1 | |
| CAI7997406.1 | LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN |
| CAI7997404.1 | LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN |
| CAI7997408.1 | LEUCINE-RICH MELANOCYTE DIFFERENTIATION-ASSOCIATED PROTEIN |
| CAI7997410.1 | HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER |
| CAI7997412.1 | |
| CAI7997414.1 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| CAI7997424.1 | |
| CAI7997422.1 | |
| CAI7997420.1 | |
| CAI7997418.1 | RUN AND SH3 DOMAIN CONTAINING |
| CAI7997416.1 | |
| CAI7997426.1 | |
| CAI7997429.1 | |
| CAI7997431.1 | |
| CAI7997433.1 | |
| CAI7997441.1 | SI:CH211-189E2.2 |
| CAI7997437.1 | SI:CH211-189E2.2 |
| CAI7997439.1 | SI:CH211-189E2.2 |
| CAI7997443.1 | SUGAR-1-PHOSPHATE GUANYL TRANSFERASE |
| CAI7997449.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI7997451.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI7997453.1 | BLR3294 PROTEIN |
| CAI7997455.1 | ACETYL-COA C-ACYLTRANSFERASE |
| CAI7997457.1 | 3-KETOACYL-COA THIOLASE, PEROXISOMAL |
| CAI7997459.1 | LONG-CHAIN-ALCOHOL OXIDASE |
| CAI7997461.1 | |
| CAI7997463.1 | |
| CAI7997465.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI7997475.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
| CAI7997473.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
| CAI7997471.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
| CAI7997469.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
| CAI7997467.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
