Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7997267.1 | SENTRIN-SPECIFIC PROTEASE 8 |
| CAI7997268.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI7997270.1 | |
| CAI7997269.1 | |
| CAI7997271.1 | |
| CAI7997272.1 | |
| CAI7997273.1 | |
| CAI7997275.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| CAI7997274.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| CAI7997276.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| CAI7997277.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| CAI7997278.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| CAI7997281.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997280.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997279.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997283.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997285.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997287.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997289.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997291.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997293.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997295.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997297.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI7997299.1 | |
| CAI7997304.1 | |
| CAI7997310.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7997306.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7997308.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7997312.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7997314.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7997324.1 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
| CAI7997322.1 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
| CAI7997320.1 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
| CAI7997318.1 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
| CAI7997326.1 | |
| CAI7997328.1 | METHIONINE SYNTHASE |
| CAI7997340.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997342.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997344.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997346.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997338.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997348.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997352.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997354.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997358.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997356.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997360.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997362.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997350.1 | GAMMA TUBULIN COMPLEX PROTEIN |
| CAI7997364.1 |
