Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7997117.1 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| CAI7997118.1 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| CAI7997119.1 | |
| CAI7997120.1 | CASEIN KINASE-RELATED |
| CAI7997122.1 | RAN BINDING PROTEIN |
| CAI7997123.1 | RAN BINDING PROTEIN |
| CAI7997124.1 | RAN BINDING PROTEIN |
| CAI7997121.1 | RAN BINDING PROTEIN |
| CAI7997125.1 | |
| CAI7997126.1 | RAS-RELATED GTP BINDING RAG/GTR YEAST |
| CAI7997127.1 | CALCIPRESSIN |
| CAI7997128.1 | CALCIPRESSIN |
| CAI7997129.1 | NUCLEAR MOVEMENT PROTEIN NUDC |
| CAI7997130.1 | NUCLEAR MOVEMENT PROTEIN NUDC |
| CAI7997131.1 | NUCLEAR MOVEMENT PROTEIN NUDC |
| CAI7997132.1 | NUCLEAR MOVEMENT PROTEIN NUDC |
| CAI7997134.1 | KELCH DOMAIN-CONTAINING PROTEIN |
| CAI7997133.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI7997135.1 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
| CAI7997136.1 | |
| CAI7997138.1 | MANNOSE-6-PHOSPHATE ISOMERASE |
| CAI7997137.1 | MANNOSE-6-PHOSPHATE ISOMERASE |
| CAI7997139.1 | MANNOSE-6-PHOSPHATE ISOMERASE |
| CAI7997140.1 | MANNOSE-6-PHOSPHATE ISOMERASE |
| CAI7997141.1 | UNCHARACTERIZED |
| CAI7997142.1 | UNCHARACTERIZED |
| CAI7997143.1 | RP42 RELATED |
| CAI7997144.1 | RP42 RELATED |
| CAI7997145.1 | RP42 RELATED |
| CAI7997146.1 | |
| CAI7997148.1 | CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED |
| CAI7997147.1 | CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED |
| CAI7997153.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
| CAI7997154.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
| CAI7997151.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
| CAI7997152.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
| CAI7997150.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
| CAI7997149.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
| CAI7997159.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997158.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997157.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997156.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997155.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997160.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997161.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997164.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997163.1 | SERINE/THREONINE-PROTEIN KINASE TAO |
| CAI7997162.1 | |
| CAI7997165.1 | MISSHAPEN LIKE KINASE 1 |
| CAI7997166.1 | CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 |
