About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8037872.1HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER
CAI8037871.1
CAI8037870.1HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER
CAI8037874.1
CAI8037875.1
CAI8037881.1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
CAI8037879.1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
CAI8037880.1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
CAI8037877.1
CAI8037876.1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
CAI8037878.1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
CAI8037882.1
CAI8037883.1NEPHRIN
CAI8037884.1
CAI8037885.1BASIGIN RELATED
CAI8037886.1
CAI8037887.1
CAI8037888.1PROTEIN SIDEKICK
CAI8037889.1
CAI8037890.1IMPORTIN BETA
CAI8037892.1IMPORTIN BETA
CAI8037891.1
CAI8037896.1
CAI8037895.1
CAI8037894.1
CAI8037893.1
CAI8037897.1
CAI8037898.1
CAI8037899.1
CAI8037900.1
CAI8037901.1
CAI8037902.1
CAI8037903.1
CAI8037904.1
CAI8037905.1
CAI8037906.1
CAI8037908.1
CAI8037909.1
CAI8037907.1
CAI8037910.1
CAI8037911.1ENOYL-COA HYDRATASE-RELATED
CAI8037912.1
CAI8037913.1
CAI8037914.1
CAI8037915.1
CAI8037916.1
CAI8037917.1TAURINE IMPORT ATP-BINDING PROTEIN-RELATED
CAI8037919.1PROTEIN SIDEKICK
CAI8037918.1PROTEIN SIDEKICK
CAI8037922.1PROTEIN SIDEKICK
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