Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8037775.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8037774.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8037773.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8037772.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8037771.1 | A-KINASE ANCHOR PROTEINS |
| CAI8037777.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8037778.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8037776.1 | DNA-DIRECTED RNA POLYMERASE |
| CAI8037779.1 | UNCHARACTERIZED |
| CAI8037785.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8037786.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8037787.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8037788.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8037783.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8037784.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8037782.1 | |
| CAI8037781.1 | |
| CAI8037780.1 | |
| CAI8037789.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| CAI8037790.1 | MYOINOSITOL OXYGENASE |
| CAI8037791.1 | MYOINOSITOL OXYGENASE |
| CAI8037792.1 | VACUOLAR SORTING PROTEIN 53 |
| CAI8037794.1 | |
| CAI8037793.1 | |
| CAI8037795.1 | |
| CAI8037796.1 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| CAI8037797.1 | |
| CAI8037798.1 | GAMMA GLUTAMYL TRANSPEPTIDASE |
| CAI8037800.1 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
| CAI8037799.1 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
| CAI8037801.1 | PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE |
| CAI8037802.1 | |
| CAI8037805.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI8037803.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI8037804.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI8037806.1 | SERINE/THREONINE-PROTEIN KINASE SBK1 |
| CAI8037808.1 | SERUM AMYLOID A |
| CAI8037807.1 | SERUM AMYLOID A |
| CAI8037809.1 | VALACYCLOVIR HYDROLASE |
| CAI8037810.1 | GLYCOGEN SYNTHASE |
| CAI8037812.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8037811.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8037813.1 | |
| CAI8037814.1 | |
| CAI8037815.1 | |
| CAI8037816.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8037817.1 | |
| CAI8037819.1 | |
| CAI8037820.1 | |
| CAI8037818.1 |
