About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_039571-T1
LLU|FUN_039572-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_039573-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_039574-T1BAND 7 PROTEIN-RELATED
LLU|FUN_039575-T1AAA-FAMILY ATPASE
LLU|FUN_039576-T1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
LLU|FUN_039577-T1
LLU|FUN_039578-T1
LLU|FUN_039579-T1
LLU|FUN_039580-T1
LLU|FUN_039581-T1
LLU|FUN_039582-T1DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
LLU|FUN_039583-T1
LLU|FUN_039584-T1
LLU|FUN_039585-T1
LLU|FUN_039586-T1
LLU|FUN_039587-T1
LLU|FUN_039588-T1
LLU|FUN_039589-T1PYRUVATE CARBOXYLASE
LLU|FUN_039590-T1ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
LLU|FUN_039591-T1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6
LLU|FUN_039592-T1
LLU|FUN_039593-T1
LLU|FUN_039594-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_039595-T1
LLU|FUN_039596-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_039597-T1CADHERIN-23
LLU|FUN_039598-T1
LLU|FUN_039599-T1DELTA(14)-STEROL REDUCTASE
LLU|FUN_039600-T1WD40 REPEAT DOMAIN 95
LLU|FUN_039601-T1WD40 REPEAT DOMAIN 95
LLU|FUN_039602-T1WD40 REPEAT DOMAIN 95
LLU|FUN_039603-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 15
LLU|FUN_039604-T1FOLLISTATIN-RELATED
LLU|FUN_039605-T1NADH-UBIQUINONE OXIDOREDUCTASE
LLU|FUN_039606-T1KRAB AND ZINC FINGER DOMAIN-CONTAINING
LLU|FUN_039607-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_039608-T1AGAP011099-PA
LLU|FUN_039609-T1
LLU|FUN_039610-T1BAND 7 PROTEIN-RELATED
LLU|FUN_039611-T1STERILE20-LIKE KINASE, ISOFORM B-RELATED
LLU|FUN_039612-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_039613-T1
LLU|FUN_039614-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_039615-T1LEISHMANOLYSIN-LIKE PEPTIDASE
LLU|FUN_039616-T1
LLU|FUN_039617-T1
LLU|FUN_039618-T1
LLU|FUN_039619-T1
LLU|FUN_039620-T1
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