About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_039621-T1
LLU|FUN_039622-T1
LLU|FUN_039623-T1SUPEROXIDE DISMUTASE CU-ZN -RELATED
LLU|FUN_039624-T1ZCCHC10 PROTEIN
LLU|FUN_039625-T1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
LLU|FUN_039626-T1
LLU|FUN_039627-T1
LLU|FUN_039628-T1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
LLU|FUN_039629-T1
LLU|FUN_039631-T1PENICILLIN-BINDING PROTEIN
LLU|FUN_039632-T1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
LLU|FUN_039633-T1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
LLU|FUN_039634-T1
LLU|FUN_039635-T1
LLU|FUN_039636-T1
LLU|FUN_039637-T1
LLU|FUN_039638-T1
LLU|FUN_039639-T1
LLU|FUN_039640-T1SPORE COAT PROTEIN SP85
LLU|FUN_039641-T1
LLU|FUN_039642-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_039643-T1TRANSCRIPTION ELONGATION FACTOR SPT6
LLU|FUN_039644-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_039645-T1
LLU|FUN_039646-T1
LLU|FUN_039647-T1
LLU|FUN_039648-T1
LLU|FUN_039649-T1
LLU|FUN_039650-T1
LLU|FUN_039651-T1
LLU|FUN_039652-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_039653-T1
LLU|FUN_039654-T1
LLU|FUN_039655-T1
LLU|FUN_039656-T1KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED
LLU|FUN_039657-T1
LLU|FUN_039658-T1-
LLU|FUN_039659-T1AGAP004733-PA
LLU|FUN_039660-T1FAMILY WITH SEQUENCE SIMILARITY 228 MEMBER A
LLU|FUN_039661-T1
LLU|FUN_039662-T1
LLU|FUN_039663-T1
LLU|FUN_039664-T1
LLU|FUN_039665-T1
LLU|FUN_039666-T1MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
LLU|FUN_039668-T1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
LLU|FUN_039669-T1UNCHARACTERIZED
LLU|FUN_039670-T1TUBULIN MONOGLYCYLASE TTLL3
LLU|FUN_039671-T1
LLU|FUN_039672-T1
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