About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_039367-T1MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS
LLU|FUN_039368-T1
LLU|FUN_039369-T1TRANSDUCIN BETA-LIKE PROTEIN 2
LLU|FUN_039370-T1RH14732P
LLU|FUN_039371-T1HISTIDINE AMMONIA-LYASE
LLU|FUN_039372-T1BREAKPOINT CLUSTER REGION PROTEIN BCR
LLU|FUN_039373-T1
LLU|FUN_039374-T1
LLU|FUN_039375-T1AGAP001705-PA
LLU|FUN_039376-T1
LLU|FUN_039377-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
LLU|FUN_039378-T1
LLU|FUN_039379-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_039380-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_039381-T1
LLU|FUN_039382-T1
LLU|FUN_039383-T1
LLU|FUN_039384-T1GLYCOSYLTRANSFERASE
LLU|FUN_039385-T1AGAP001705-PA
LLU|FUN_039386-T1
LLU|FUN_039387-T1AGAP001705-PA
LLU|FUN_039388-T1
LLU|FUN_039389-T1CHITIN BINDING PERITROPHIN-A
LLU|FUN_039390-T1
LLU|FUN_039391-T1
LLU|FUN_039392-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_039393-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_039394-T1UNCHARACTERIZED
LLU|FUN_039395-T1NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1
LLU|FUN_039396-T1
LLU|FUN_039397-T1
LLU|FUN_039398-T1
LLU|FUN_039399-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_039400-T1
LLU|FUN_039401-T1
LLU|FUN_039402-T1MUCIN
LLU|FUN_039403-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_039404-T1
LLU|FUN_039405-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_039406-T1MUCIN 4-RELATED
LLU|FUN_039407-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_039408-T1
LLU|FUN_039409-T1
LLU|FUN_039410-T1
LLU|FUN_039411-T1
LLU|FUN_039412-T1
LLU|FUN_039413-T1
LLU|FUN_039414-T1
LLU|FUN_039415-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_039416-T1
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