About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_038665-T1MYOSIN
LLU|FUN_038666-T1DILUTE DOMAIN-CONTAINING PROTEIN YPR089W
LLU|FUN_038667-T1
LLU|FUN_038668-T1
LLU|FUN_038669-T1
LLU|FUN_038670-T1
LLU|FUN_038671-T1SMALL NUCLEAR RIBONUCLEOPROTEIN
LLU|FUN_038672-T1
LLU|FUN_038673-T1
LLU|FUN_038674-T1
LLU|FUN_038675-T1
LLU|FUN_038676-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_038677-T1
LLU|FUN_038678-T1
LLU|FUN_038679-T1SIGNAL PEPTIDE PEPTIDASE
LLU|FUN_038680-T1CDC42 SMALL EFFECTOR PROTEIN HOMOLOG
LLU|FUN_038681-T1
LLU|FUN_038682-T1
LLU|FUN_038683-T1MYOTUBULARIN-RELATED
LLU|FUN_038684-T1TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE
LLU|FUN_038685-T1ORF PROTEIN
LLU|FUN_038686-T1
LLU|FUN_038687-T1
LLU|FUN_038688-T1
LLU|FUN_038689-T1
LLU|FUN_038690-T1
LLU|FUN_038691-T1RUN AND SH3 DOMAIN CONTAINING
LLU|FUN_038692-T1
LLU|FUN_038693-T1NAD(P)H-HYDRATE EPIMERASE
LLU|FUN_038694-T1
LLU|FUN_038695-T1
LLU|FUN_038696-T1
LLU|FUN_038697-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_038698-T1
LLU|FUN_038699-T1
LLU|FUN_038700-T1
LLU|FUN_038701-T1
LLU|FUN_038702-T1RAP1 GTPASE-GDP DISSOCIATION STIMULATOR 1
LLU|FUN_038703-T1
LLU|FUN_038704-T1
LLU|FUN_038705-T1SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
LLU|FUN_038706-T1
LLU|FUN_038707-T1SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
LLU|FUN_038708-T1
LLU|FUN_038709-T1
LLU|FUN_038710-T1POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN
LLU|FUN_038711-T1UBA-LIKE DOMAIN-CONTAINING PROTEIN 2
LLU|FUN_038712-T1MAHOGUNIN
LLU|FUN_038713-T1
LLU|FUN_038714-T160S RIBOSOMAL PROTEIN L38
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