About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_038359-T1
LLU|FUN_038360-T1
LLU|FUN_038361-T1
LLU|FUN_038362-T1
LLU|FUN_038363-T1IRE1-RELATED
LLU|FUN_038364-T1OVOCHYMASE-RELATED
LLU|FUN_038365-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_038366-T1TRYPSIN-RELATED
LLU|FUN_038367-T1
LLU|FUN_038368-T1
LLU|FUN_038369-T1SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED
LLU|FUN_038370-T1PROTEIN DIAPHANOUS
LLU|FUN_038371-T1PROTEIN DIAPHANOUS
LLU|FUN_038372-T1
LLU|FUN_038373-T1SACSIN
LLU|FUN_038374-T1ACYL-COA SYNTHETASE
LLU|FUN_038375-T1
LLU|FUN_038376-T1CYTOCHROME P450 508A4-RELATED
LLU|FUN_038377-T1CYTOCHROME P450 508A4-RELATED
LLU|FUN_038378-T1
LLU|FUN_038379-T1
LLU|FUN_038380-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_038381-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_038382-T1
LLU|FUN_038383-T1
LLU|FUN_038384-T1
LLU|FUN_038385-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_038386-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_038387-T1
LLU|FUN_038388-T1LIM/HOMEOBOX PROTEIN LHX
LLU|FUN_038389-T1GLR0591 PROTEIN
LLU|FUN_038390-T1
LLU|FUN_038391-T1
LLU|FUN_038392-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_038393-T1
LLU|FUN_038394-T1GLR0591 PROTEIN
LLU|FUN_038395-T1
LLU|FUN_038396-T1
LLU|FUN_038397-T1
LLU|FUN_038398-T1SERINE PEPTIDASE S9 FAMILY MEMBER
LLU|FUN_038399-T1MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42
LLU|FUN_038400-T1
LLU|FUN_038401-T1RE45066P-RELATED
LLU|FUN_038402-T1RIBOSOMAL PROTEIN L2
LLU|FUN_038403-T1LSM1
LLU|FUN_038404-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_038405-T1FACIOGENITAL DYSPLASIA PROTEIN
LLU|FUN_038406-T1
LLU|FUN_038407-T1
LLU|FUN_038408-T1ATP-DEPENDENT RNA HELICASE DBP3
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