About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_038308-T1RAGULATOR COMPLEX PROTEIN LAMTOR1
LLU|FUN_038309-T1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
LLU|FUN_038310-T1CENTROSOMAL PROTEIN 2
LLU|FUN_038311-T1RNF121 PROTEIN
LLU|FUN_038312-T1
LLU|FUN_038313-T1
LLU|FUN_038314-T1PROTEIN CBG12054-RELATED
LLU|FUN_038315-T1POLY ADP-RIBOSE GLYCOHYDROLASE
LLU|FUN_038316-T1
LLU|FUN_038317-T1
LLU|FUN_038318-T1
LLU|FUN_038319-T1
LLU|FUN_038320-T1
LLU|FUN_038321-T1
LLU|FUN_038322-T1
LLU|FUN_038323-T1
LLU|FUN_038324-T1PROTEIN CBG12054-RELATED
LLU|FUN_038325-T1
LLU|FUN_038326-T1
LLU|FUN_038327-T1
LLU|FUN_038328-T1
LLU|FUN_038329-T1
LLU|FUN_038330-T1
LLU|FUN_038331-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_038332-T1
LLU|FUN_038333-T1PROTECTION OF TELOMERES 1
LLU|FUN_038334-T1ARYLSULFATASE FAMILY MEMBER
LLU|FUN_038335-T1CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN
LLU|FUN_038336-T1DNA-DIRECTED RNA POLYMERASE
LLU|FUN_038337-T1
LLU|FUN_038338-T1GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
LLU|FUN_038339-T1DNA POLYMERASE TYPE-X FAMILY MEMBER
LLU|FUN_038340-T1
LLU|FUN_038341-T1
LLU|FUN_038342-T1
LLU|FUN_038343-T1DNA POLYMERASE TYPE-X FAMILY MEMBER
LLU|FUN_038344-T1BC025462 PROTEIN
LLU|FUN_038345-T1
LLU|FUN_038346-T1-
LLU|FUN_038347-T1
LLU|FUN_038348-T1
LLU|FUN_038349-T1
LLU|FUN_038350-T1RIBONUCLEASE P PROTEIN SUBUNIT P38
LLU|FUN_038351-T15'-NUCLEOTIDASE DOMAIN-CONTAINING
LLU|FUN_038352-T1
LLU|FUN_038353-T1MYOSIN REGULATORY LIGHT CHAIN 2
LLU|FUN_038355-T1LP04239P
LLU|FUN_038356-T1
LLU|FUN_038357-T1
LLU|FUN_038358-T1
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