About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_038815-T1HMG DOMAIN-CONTAINING PROTEIN 4
LLU|FUN_038816-T1PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
LLU|FUN_038817-T160S RIBOSOMAL PROTEIN L4
LLU|FUN_038818-T1UNCHARACTERIZED
LLU|FUN_038819-T1UNCHARACTERIZED
LLU|FUN_038820-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
LLU|FUN_038821-T1TUBULIN POLYGLUTAMYLASE
LLU|FUN_038822-T1HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
LLU|FUN_038823-T1
LLU|FUN_038824-T1
LLU|FUN_038825-T130S RIBOSOMAL PROTEIN S10 FAMILY MEMBER
LLU|FUN_038826-T1TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
LLU|FUN_038827-T1HISTONE ACETYLTRANSFERASE-RELATED
LLU|FUN_038828-T1
LLU|FUN_038829-T1
LLU|FUN_038830-T1
LLU|FUN_038831-T1
LLU|FUN_038832-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_038833-T1
LLU|FUN_038834-T1
LLU|FUN_038835-T1
LLU|FUN_038836-T1
LLU|FUN_038837-T1
LLU|FUN_038838-T1HISTONE ACETYLTRANSFERASE-RELATED
LLU|FUN_038839-T1SOLUTE CARRIER FAMILY 17
LLU|FUN_038840-T160S RIBOSOMAL PROTEIN L17
LLU|FUN_038841-T1
LLU|FUN_038842-T1
LLU|FUN_038843-T1
LLU|FUN_038844-T1SEMAPHORIN
LLU|FUN_038845-T1
LLU|FUN_038846-T1OS05G0565100 PROTEIN
LLU|FUN_038847-T1
LLU|FUN_038848-T1
LLU|FUN_038849-T1
LLU|FUN_038850-T1ATAXIN-10
LLU|FUN_038851-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
LLU|FUN_038852-T1PPP4R2-RELATED PROTEIN
LLU|FUN_038853-T1
LLU|FUN_038854-T1
LLU|FUN_038855-T1
LLU|FUN_038856-T1
LLU|FUN_038857-T1
LLU|FUN_038858-T1
LLU|FUN_038859-T1ACTIN
LLU|FUN_038860-T1
LLU|FUN_038861-T1AGAP008228-PA
LLU|FUN_038862-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
LLU|FUN_038863-T1
LLU|FUN_038864-T1ELONGATION FACTOR TS
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