About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037794-T1
LLU|FUN_037795-T15'->3' EXORIBONUCLEASE
LLU|FUN_037796-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
LLU|FUN_037797-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
LLU|FUN_037798-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
LLU|FUN_037799-T1
LLU|FUN_037800-T1
LLU|FUN_037802-T1PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR
LLU|FUN_037803-T1
LLU|FUN_037804-T1AMINO ACID TRANSPORTER
LLU|FUN_037805-T1
LLU|FUN_037806-T1AMINO ACID TRANSPORTER
LLU|FUN_037807-T13-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE
LLU|FUN_037808-T1F-BOX ONLY PROTEIN 28
LLU|FUN_037809-T1
LLU|FUN_037810-T1
LLU|FUN_037811-T1
LLU|FUN_037812-T1
LLU|FUN_037813-T1
LLU|FUN_037814-T1-
LLU|FUN_037815-T1
LLU|FUN_037816-T1TRANSLATION ELONGATION FACTOR G-RELATED
LLU|FUN_037817-T1
LLU|FUN_037819-T1
LLU|FUN_037820-T1
LLU|FUN_037821-T1
LLU|FUN_037822-T1
LLU|FUN_037823-T1
LLU|FUN_037824-T1
LLU|FUN_037825-T1
LLU|FUN_037826-T150S RIBOSOMAL PROTEIN L15
LLU|FUN_037827-T1AD039 HT014 THIOREDOXIN FAMILY TRP26
LLU|FUN_037828-T1
LLU|FUN_037829-T1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
LLU|FUN_037830-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
LLU|FUN_037831-T1UNCHARACTERIZED
LLU|FUN_037832-T1
LLU|FUN_037834-T1
LLU|FUN_037835-T1
LLU|FUN_037836-T1
LLU|FUN_037837-T1
LLU|FUN_037838-T1
LLU|FUN_037839-T1TRANSCRIPTION INITIATION FACTOR IIB-RELATED
LLU|FUN_037840-T1PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1
LLU|FUN_037841-T1DEP DOMAIN-CONTAINING
LLU|FUN_037842-T1OXYSTEROL-BINDING PROTEIN-RELATED
LLU|FUN_037843-T1
LLU|FUN_037844-T1
LLU|FUN_037845-T1
LLU|FUN_037846-T1
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