About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037694-T1
LLU|FUN_037695-T1E3 UBIQUITIN-PROTEIN LIGASE TTC3
LLU|FUN_037696-T1COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17
LLU|FUN_037697-T1
LLU|FUN_037698-T1DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
LLU|FUN_037699-T1CYSTEINYL-TRNA SYNTHETASE
LLU|FUN_037700-T1GLYCEROL-3-PHOSPHATE DEHYDROGENASE
LLU|FUN_037701-T1IMPORTIN BETA
LLU|FUN_037702-T1
LLU|FUN_037703-T1
LLU|FUN_037704-T1
LLU|FUN_037705-T1
LLU|FUN_037706-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_037707-T1
LLU|FUN_037708-T1
LLU|FUN_037709-T1
LLU|FUN_037710-T1SLR1441 PROTEIN
LLU|FUN_037711-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
LLU|FUN_037712-T1
LLU|FUN_037713-T1
LLU|FUN_037714-T1
LLU|FUN_037715-T1
LLU|FUN_037716-T1
LLU|FUN_037717-T1
LLU|FUN_037718-T1
LLU|FUN_037719-T1
LLU|FUN_037720-T1ASPARTYL PROTEASE DDI-RELATED
LLU|FUN_037721-T1RING FINGER PROTEIN 141-RELATED
LLU|FUN_037722-T1
LLU|FUN_037723-T1RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
LLU|FUN_037724-T1
LLU|FUN_037725-T1EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
LLU|FUN_037726-T1
LLU|FUN_037727-T1
LLU|FUN_037728-T1LUNG ADENOMA SUSCEPTIBILITY 1-RELATED
LLU|FUN_037729-T1FRUCTOSE-BISPHOSPHATE ALDOLASE
LLU|FUN_037730-T1SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
LLU|FUN_037731-T1
LLU|FUN_037732-T1SERINE/THREONINE PROTEIN PHOSPHATASE
LLU|FUN_037733-T1
LLU|FUN_037734-T1
LLU|FUN_037735-T1
LLU|FUN_037736-T1MOLTING PROTEIN MLT-4
LLU|FUN_037737-T1GEO07735P1-RELATED-RELATED
LLU|FUN_037738-T1
LLU|FUN_037739-T1WD-40 REPEAT PROTEIN
LLU|FUN_037740-T1N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED
LLU|FUN_037741-T1
LLU|FUN_037742-T1
LLU|FUN_037743-T1
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