About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037441-T1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3
LLU|FUN_037442-T18-OXOGUANINE DNA GLYCOSYLASE
LLU|FUN_037443-T1TUBULIN
LLU|FUN_037444-T1TUBULIN
LLU|FUN_037445-T1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
LLU|FUN_037446-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
LLU|FUN_037447-T1CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
LLU|FUN_037448-T1UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1
LLU|FUN_037449-T1IG-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_037450-T1ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED
LLU|FUN_037451-T1UNCHARACTERIZED
LLU|FUN_037452-T1
LLU|FUN_037453-T1UNCHARACTERIZED
LLU|FUN_037454-T1
LLU|FUN_037455-T1
LLU|FUN_037456-T1
LLU|FUN_037457-T1ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
LLU|FUN_037458-T1TBC1 DOMAIN FAMILY MEMBER 7
LLU|FUN_037459-T1UDP- GLUCOSE PYROPHOSPHORYLASE
LLU|FUN_037460-T160S RIBOSOMAL PROTEIN L12
LLU|FUN_037461-T1
LLU|FUN_037462-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
LLU|FUN_037463-T1
LLU|FUN_037464-T1
LLU|FUN_037465-T1
LLU|FUN_037466-T1
LLU|FUN_037467-T1
LLU|FUN_037468-T1
LLU|FUN_037469-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
LLU|FUN_037470-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
LLU|FUN_037471-T1
LLU|FUN_037472-T1AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR
LLU|FUN_037473-T1ABC TRANSPORTER G FAMILY MEMBER 28
LLU|FUN_037474-T1
LLU|FUN_037475-T1
LLU|FUN_037476-T1
LLU|FUN_037477-T1
LLU|FUN_037478-T1
LLU|FUN_037479-T1
LLU|FUN_037480-T1
LLU|FUN_037481-T1
LLU|FUN_037482-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_037483-T1
LLU|FUN_037484-T1
LLU|FUN_037485-T1
LLU|FUN_037486-T1FI19908P1
LLU|FUN_037487-T1
LLU|FUN_037488-T1
LLU|FUN_037489-T1
LLU|FUN_037490-T1
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