About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037594-T1
LLU|FUN_037595-T1
LLU|FUN_037596-T1BETA-HEXOSAMINIDASE
LLU|FUN_037597-T1
LLU|FUN_037598-T1
LLU|FUN_037599-T1
LLU|FUN_037600-T1
LLU|FUN_037601-T1
LLU|FUN_037602-T1
LLU|FUN_037603-T1
LLU|FUN_037604-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE
LLU|FUN_037605-T1
LLU|FUN_037606-T1
LLU|FUN_037607-T1TRANSMEMBRANE PROTEIN
LLU|FUN_037608-T1TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1
LLU|FUN_037609-T1CASEIN KINASE-RELATED
LLU|FUN_037610-T1
LLU|FUN_037611-T1EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER
LLU|FUN_037612-T1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
LLU|FUN_037613-T1
LLU|FUN_037614-T1MYELIN TRANSCRIPTION FACTOR 1-RELATED
LLU|FUN_037615-T1
LLU|FUN_037616-T1KIAA0586 PROTEIN
LLU|FUN_037617-T1ZINC FINGER PROTEIN
LLU|FUN_037618-T1
LLU|FUN_037619-T1DIMETHYLADENOSINE TRANSFERASE
LLU|FUN_037620-T1
LLU|FUN_037621-T1HEAT SHOCK PROTEIN 90 FAMILY MEMBER
LLU|FUN_037622-T1WD REPEAT PROTEIN
LLU|FUN_037623-T1
LLU|FUN_037624-T1
LLU|FUN_037625-T1
LLU|FUN_037626-T1-
LLU|FUN_037627-T1
LLU|FUN_037628-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_037629-T1
LLU|FUN_037630-T1
LLU|FUN_037631-T1
LLU|FUN_037632-T1
LLU|FUN_037633-T1
LLU|FUN_037634-T1
LLU|FUN_037635-T1
LLU|FUN_037636-T1
LLU|FUN_037637-T1NEUROLIGIN
LLU|FUN_037638-T1
LLU|FUN_037639-T1
LLU|FUN_037640-T1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
LLU|FUN_037641-T1UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN
LLU|FUN_037642-T1
LLU|FUN_037643-T1ATP-DEPENDENT RNA HELICASE DBP3
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