About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037289-T1
LLU|FUN_037290-T1
LLU|FUN_037291-T1
LLU|FUN_037292-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_037293-T1
LLU|FUN_037294-T1
LLU|FUN_037295-T1
LLU|FUN_037296-T1
LLU|FUN_037297-T1
LLU|FUN_037298-T1COLLAGEN ALPHA
LLU|FUN_037299-T1THREE PRIME REPAIR EXONUCLEASE 1, 2
LLU|FUN_037300-T1
LLU|FUN_037301-T1THREE PRIME REPAIR EXONUCLEASE 1, 2
LLU|FUN_037302-T1LD44762P
LLU|FUN_037303-T1GLUTAREDOXIN
LLU|FUN_037304-T1
LLU|FUN_037305-T1
LLU|FUN_037306-T1
LLU|FUN_037307-T1
LLU|FUN_037308-T1
LLU|FUN_037309-T1
LLU|FUN_037310-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_037311-T1
LLU|FUN_037312-T1PBS LYASE HEAT-LIKE PROTEIN
LLU|FUN_037313-T1CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
LLU|FUN_037314-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_037315-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_037316-T1
LLU|FUN_037317-T1GUANINE NUCLEOTIDE EXCHANGE C9ORF72
LLU|FUN_037318-T1DULLARD PROTEIN PHOSPHATASE
LLU|FUN_037319-T1
LLU|FUN_037320-T1
LLU|FUN_037321-T1
LLU|FUN_037322-T1
LLU|FUN_037323-T1E3 UBIQUITIN-PROTEIN LIGASE TRIP12
LLU|FUN_037324-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_037325-T1ZINC FINGER PROTEIN
LLU|FUN_037326-T1
LLU|FUN_037327-T1
LLU|FUN_037328-T1PROTEIN ZERKNUELLT 1-RELATED
LLU|FUN_037329-T1
LLU|FUN_037330-T1
LLU|FUN_037331-T1TRANSMEMBRANE CHANNEL-RELATED
LLU|FUN_037332-T1TRANSMEMBRANE CHANNEL-RELATED
LLU|FUN_037333-T1
LLU|FUN_037334-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_037335-T1HEAT SHOCK PROTEIN 70KDA
LLU|FUN_037336-T1PROTEIN CBG24663
LLU|FUN_037337-T1IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1
LLU|FUN_037338-T1IQ CALMODULIN-BINDING MOTIF CONTAINING PROTEIN 1
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