About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037339-T1CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
LLU|FUN_037340-T1KRAB DOMAIN C2H2 ZINC FINGER
LLU|FUN_037341-T1SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE
LLU|FUN_037342-T1
LLU|FUN_037343-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
LLU|FUN_037344-T1BONUS, ISOFORM C-RELATED
LLU|FUN_037345-T1
LLU|FUN_037346-T1HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT
LLU|FUN_037347-T1
LLU|FUN_037348-T1ASPARTATE AMINOTRANSFERASE
LLU|FUN_037349-T1
LLU|FUN_037350-T1
LLU|FUN_037351-T1
LLU|FUN_037352-T1
LLU|FUN_037353-T1CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN
LLU|FUN_037354-T1-
LLU|FUN_037355-T1VILLIN
LLU|FUN_037356-T1VILLIN
LLU|FUN_037357-T1
LLU|FUN_037358-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22
LLU|FUN_037359-T1ECDYSONE-INDUCIBLE GENE E1, ISOFORM A
LLU|FUN_037360-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_037361-T1
LLU|FUN_037362-T1
LLU|FUN_037363-T1
LLU|FUN_037364-T1
LLU|FUN_037365-T1
LLU|FUN_037366-T1
LLU|FUN_037367-T1
LLU|FUN_037368-T1DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN
LLU|FUN_037369-T1
LLU|FUN_037370-T1
LLU|FUN_037371-T1VIRAL IAP-ASSOCIATED FACTOR HOMOLOG
LLU|FUN_037372-T1PHD FINGER PROTEIN 20-RELATED
LLU|FUN_037373-T1SOLUTE CARRIER FAMILY 17
LLU|FUN_037374-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_037375-T1
LLU|FUN_037376-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_037377-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_037378-T1FUSELESS, ISOFORM A
LLU|FUN_037379-T1
LLU|FUN_037380-T1FATTY ACID ACYL TRANSFERASE-RELATED
LLU|FUN_037381-T1FATTY ACID ACYL TRANSFERASE-RELATED
LLU|FUN_037382-T1BCL-2 RELATED
LLU|FUN_037383-T1
LLU|FUN_037384-T1
LLU|FUN_037385-T1
LLU|FUN_037386-T1
LLU|FUN_037387-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
LLU|FUN_037388-T1
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