About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_037948-T1DI-N-ACETYLCHITOBIASE
LLU|FUN_037949-T1
LLU|FUN_037950-T1SI:CH211-108C17.2-RELATED-RELATED
LLU|FUN_037951-T1
LLU|FUN_037952-T1DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
LLU|FUN_037953-T1
LLU|FUN_037954-T1
LLU|FUN_037955-T1
LLU|FUN_037956-T1
LLU|FUN_037957-T1
LLU|FUN_037958-T1
LLU|FUN_037959-T1
LLU|FUN_037960-T1
LLU|FUN_037961-T1
LLU|FUN_037962-T1OVOCHYMASE-RELATED
LLU|FUN_037963-T1PYRAZINAMIDASE/NICOTINAMIDASE
LLU|FUN_037964-T1
LLU|FUN_037965-T1
LLU|FUN_037966-T1
LLU|FUN_037967-T1
LLU|FUN_037968-T1
LLU|FUN_037969-T1
LLU|FUN_037970-T1
LLU|FUN_037971-T1
LLU|FUN_037972-T1
LLU|FUN_037973-T1
LLU|FUN_037980-T1
LLU|FUN_037981-T1
LLU|FUN_037982-T1RIBOSOMAL PROTEIN L5-RELATED
LLU|FUN_037983-T1SARCOMA ANTIGEN NY-SAR-24/CYTOSKELETAL PROTEIN SOJO
LLU|FUN_037984-T1
LLU|FUN_037985-T1
LLU|FUN_037986-T1
LLU|FUN_037987-T1
LLU|FUN_037988-T1
LLU|FUN_037989-T1PAIRED MESODERM HOMEOBOX PROTEIN 1-RELATED
LLU|FUN_037990-T1
LLU|FUN_037991-T1
LLU|FUN_037992-T1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
LLU|FUN_037993-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_037994-T1
LLU|FUN_037995-T1
LLU|FUN_037996-T1
LLU|FUN_037997-T1
LLU|FUN_037998-T1
LLU|FUN_037999-T1ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG
LLU|FUN_038000-T1DFG10 PROTEIN
LLU|FUN_038001-T1UNCHARACTERIZED
LLU|FUN_038002-T1DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS
LLU|FUN_038003-T1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
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