About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_040176-T12-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED
OS493_040177-T1
OS493_040178-T1
OS493_040179-T1
OS493_040180-T1
OS493_040181-T1MALE FERTILITY FACTOR KL5
OS493_040182-T1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
OS493_040183-T1
OS493_040184-T1
OS493_040185-T1NADH-CYTOCHROME B5 REDUCTASE
OS493_040186-T1ZINC FINGER PROTEIN ZIC AND GLI
OS493_040187-T1ZGC:153352
OS493_040188-T1
OS493_040190-T1ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE
OS493_040191-T1
OS493_040192-T1ATP-DEPENDENT RNA HELICASE
OS493_040193-T1
OS493_040194-T1
OS493_040195-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
OS493_040196-T1
OS493_040197-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
OS493_040199-T1
OS493_040200-T1
OS493_040201-T1DPY-19-LIKE 1, LIKE (H. SAPIENS)
OS493_040202-T1DNA REPAIR PROTEIN XRCC4
OS493_040203-T1
OS493_040204-T1
OS493_040205-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
OS493_040206-T1
OS493_040207-T1
OS493_040208-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_040209-T1LD33695P
OS493_040210-T1
OS493_040211-T1
OS493_040212-T1
OS493_040213-T1
OS493_040214-T1
OS493_040215-T1
OS493_040216-T1
OS493_040217-T1
OS493_040218-T1
OS493_040219-T1TRANSCRIPTION INITIATION FACTOR IIH-RELATED
OS493_040220-T1
OS493_040221-T1CONTACTIN 5
OS493_040222-T1ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED
OS493_040223-T1
OS493_040224-T1S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
OS493_040225-T1
OS493_040226-T1
OS493_040227-T1
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