About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 732 733 734 735 736 737 738 739 740 741 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_015900-T1PROTEIN DISPATCHED-RELATED
OS493_015901-T1METALLOPHOSPHOESTERASE
OS493_015902-T1PROTEIN LIN-7 HOMOLOG
OS493_015903-T1PHOSPHATIDYLSERINE DECARBOXYLASE
OS493_015904-T1-
OS493_015905-T139A RIBOSOMAL PROTEIN L50, MITOCHONDRIAL
OS493_015906-T1NUCLEOPORIN NUP84-RELATED
OS493_015907-T1NUCLEOPORIN NUP84-RELATED
OS493_015908-T1TRANSLATIONAL ACTIVATOR GCN1-RELATED
OS493_015909-T1TRANSLATIONAL ACTIVATOR GCN1-RELATED
OS493_015910-T1E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED
OS493_015911-T1TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
OS493_015912-T1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
OS493_015913-T1FLOTILLIN-RELATED
OS493_015914-T1FLOTILLIN-RELATED
OS493_015915-T1SEC14 RELATED PROTEIN
OS493_015916-T1SNF2/RAD54 FAMILY MEMBER
OS493_015917-T1-
OS493_015918-T1CENTROMERE PROTEIN V
OS493_015919-T1CENTROMERE PROTEIN V
TOP