About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 730 731 732 733 734 735 736 737 738 739 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_039831-T1
OS493_039832-T1WD REPEAT-CONTAINING PROTEIN 17
OS493_039833-T1
OS493_039834-T1
OS493_039835-T1
OS493_039836-T1
OS493_039837-T1
OS493_039839-T1SERINE HYDROXYMETHYLTRANSFERASE
OS493_039840-T1SERINE HYDROXYMETHYLTRANSFERASE
OS493_039841-T1PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
OS493_039842-T1VILLIN
OS493_039843-T1VILLIN
OS493_039844-T1
OS493_039845-T1
OS493_039846-T1
OS493_039847-T1
OS493_039848-T1
OS493_039849-T1
OS493_039851-T1
OS493_039852-T1PANTOTHENATE KINASE
OS493_039853-T1
OS493_039854-T1
OS493_039855-T1
OS493_039856-T1
OS493_039857-T1
OS493_039858-T1ANION EXCHANGE PROTEIN
OS493_039859-T1ANION EXCHANGE PROTEIN
OS493_039860-T1
OS493_039862-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
OS493_039863-T1
OS493_039864-T1
OS493_039865-T1
OS493_039866-T1OPSIN
OS493_039867-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
OS493_039868-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
OS493_039869-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
OS493_039870-T1COATOMER SUBUNIT EPSILON
OS493_039871-T1CHITINASE
OS493_039873-T1
OS493_039874-T1MONOCARBOXYLATE TRANSPORTER
OS493_039875-T1MONOCARBOXYLATE TRANSPORTER
OS493_039876-T1PROPERDIN
OS493_039877-T1
OS493_039878-T1TUBULIN
OS493_039879-T160S ACIDIC RIBOSOMAL PROTEIN P1
OS493_039880-T1
OS493_039881-T1
OS493_039885-T1
OS493_039886-T1SOLUTE CARRIER FAMILY 22 MEMBER
OS493_039887-T1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
TOP