About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_039508-T1E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER
OS493_039509-T1
OS493_039510-T1EXPRESSED PROTEIN
OS493_039512-T1GH01354P
OS493_039513-T1LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED
OS493_039514-T1
OS493_039516-T1
OS493_039517-T1RNA METHYLTRANSFERASE
OS493_039518-T1
OS493_039519-T1
OS493_039520-T1
OS493_039522-T1SKP1
OS493_039523-T1-
OS493_039524-T1
OS493_039525-T1ASPARTYL-TRNA SYNTHETASE
OS493_039526-T1
OS493_039527-T1
OS493_039528-T1UNCHARACTERIZED
OS493_039529-T1UNCHARACTERIZED
OS493_039530-T1
OS493_039531-T1
OS493_039532-T1HYR DOMAIN-CONTAINING PROTEIN
OS493_039533-T1
OS493_039534-T1
OS493_039535-T1
OS493_039536-T1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
OS493_039537-T1
OS493_039538-T1
OS493_039539-T1EXOCYST COMPLEX COMPONENT 4
OS493_039540-T1
OS493_039541-T1
OS493_039542-T1
OS493_039543-T1
OS493_039544-T1ALPHA- 1,3 -FUCOSYLTRANSFERASE
OS493_039545-T1
OS493_039546-T1
OS493_039547-T1
OS493_039548-T1JNK1/MAPK8-ASSOCIATED MEMBRANE PROTEIN
OS493_039549-T1
OS493_039550-T1
OS493_039551-T1
OS493_039552-T1
OS493_039553-T1
OS493_039554-T1
OS493_039555-T1
OS493_039556-T1
OS493_039557-T1
OS493_039558-T1
OS493_039559-T1
OS493_039560-T1
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