About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 721 722 723 724 725 726 727 728 729 730 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_039343-T1CHARGED MULTIVESICULAR BODY PROTEIN
OS493_039344-T1
OS493_039345-T1CRUMBS FAMILY MEMBER
OS493_039346-T1
OS493_039347-T1IGF-LIKE FAMILY RECEPTOR 1
OS493_039348-T1SI:DKEY-97L20.6
OS493_039349-T1GLR0591 PROTEIN
OS493_039350-T1
OS493_039351-T1
OS493_039352-T1
OS493_039354-T1
OS493_039355-T1PROTEIN CBG12054-RELATED
OS493_039356-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_039357-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_039358-T1E1A-BINDING PROTEIN P400-RELATED
OS493_039359-T1
OS493_039360-T1
OS493_039361-T1LON PROTEASE
OS493_039362-T1
OS493_039363-T1LD33804P
OS493_039364-T1
OS493_039365-T1
OS493_039366-T1SODIUM/HYDROGEN EXCHANGER
OS493_039367-T1
OS493_039368-T1
OS493_039370-T1
OS493_039371-T1
OS493_039372-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
OS493_039373-T1
OS493_039374-T1GTP PYROPHOSPHOKINASE YJBM
OS493_039375-T1
OS493_039376-T1
OS493_039377-T1
OS493_039379-T1
OS493_039381-T1
OS493_039382-T1
OS493_039383-T1
OS493_039384-T1SERINE PROTEASE INHIBITOR, SERPIN
OS493_039386-T1
OS493_039387-T1
OS493_039388-T1TETRATRICOPEPTIDE REPEAT PROTEIN 23
OS493_039389-T1ROPPORIN-1-LIKE PROTEIN
OS493_039390-T1SPINAL CORD EXPRESSION PROTEIN 4
OS493_039391-T1COLLAGEN ALPHA
OS493_039392-T1DNA-DIRECTED RNA POLYMERASE III
OS493_039393-T1PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED
OS493_039394-T1
OS493_039395-T1
OS493_039396-T1INTERFERON-INDUCIBLE GTPASE
OS493_039397-T1PROTEIN ARGININE N-METHYLTRANSFERASE
TOP