About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_039124-T1
OS493_039125-T1UNCHARACTERIZED
OS493_039126-T1
OS493_039127-T1
OS493_039128-T1
OS493_039130-T1
OS493_039131-T1
OS493_039132-T1
OS493_039133-T1
OS493_039134-T1
OS493_039135-T1
OS493_039137-T1WD40 REPEAT DOMAIN 95
OS493_039138-T1
OS493_039139-T1
OS493_039140-T1
OS493_039141-T1
OS493_039142-T1ACYL-COENZYME A SYNTHETASE
OS493_039143-T1WD REPEAT DOMAIN-RELATED
OS493_039145-T1
OS493_039146-T1CLASP
OS493_039147-T1PHOSPHOLIPID SCRAMBLASE-RELATED
OS493_039148-T1
OS493_039149-T1
OS493_039151-T1AUTOPHAGY-RELATED 2, ISOFORM A
OS493_039152-T1AUTOPHAGY-RELATED 2, ISOFORM A
OS493_039153-T1
OS493_039154-T1BETA TRANSDUCIN-RELATED PROTEIN
OS493_039155-T1
OS493_039156-T1
OS493_039157-T1HISTIDINE-RICH GLYCOPROTEIN
OS493_039158-T1UNCHARACTERIZED
OS493_039159-T1-
OS493_039161-T1
OS493_039162-T1PROTEIN KINASE PKN/PRK1, EFFECTOR
OS493_039163-T1BEIGE/BEACH-RELATED
OS493_039164-T1
OS493_039165-T1
OS493_039166-T1LEUCOKININ RECEPTOR-RELATED
OS493_039168-T1
OS493_039169-T1BARDET-BIEDL SYNDROME 7 PROTEIN
OS493_039170-T1ISOBUTYRYL-COA DEHYDROGENASE
OS493_039171-T1ISOBUTYRYL-COA DEHYDROGENASE
OS493_039172-T1
OS493_039173-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_039174-T1
OS493_039175-T1
OS493_039176-T1
OS493_039178-T1
OS493_039180-T1
OS493_039181-T1
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