About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 713 714 715 716 717 718 719 720 721 722 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_038904-T1
OS493_038905-T1WD REPEAT PROTEIN 26-RELATED
OS493_038906-T1
OS493_038907-T1
OS493_038908-T1LIPOXYGENASE
OS493_038909-T1SLL0310 PROTEIN
OS493_038910-T1SLL0310 PROTEIN
OS493_038912-T1CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS
OS493_038913-T1
OS493_038914-T1
OS493_038915-T1
OS493_038918-T1
OS493_038919-T1
OS493_038920-T1
OS493_038921-T1
OS493_038922-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_038923-T1
OS493_038925-T1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
OS493_038926-T1
OS493_038927-T1CCHC-TYPE DOMAIN-CONTAINING PROTEIN
OS493_038928-T1
OS493_038930-T1ACETYL-COA C-ACYLTRANSFERASE
OS493_038931-T1
OS493_038932-T1FATTY ACID ACYL TRANSFERASE-RELATED
OS493_038933-T1FATTY ACID ACYL TRANSFERASE-RELATED
OS493_038935-T1TITIN
OS493_038936-T1TITIN
OS493_038937-T1
OS493_038938-T1ORGANIC ANION TRANSPORTER
OS493_038939-T1ORGANIC ANION TRANSPORTER
OS493_038940-T1
OS493_038941-T1DUF3504 DOMAIN-CONTAINING PROTEIN
OS493_038942-T1
OS493_038943-T1
OS493_038944-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
OS493_038945-T1ANKYRIN REPEAT FAMILY PROTEIN
OS493_038946-T1
OS493_038947-T1
OS493_038948-T1ELECTRON TRANSPORT OXIDOREDUCTASE
OS493_038949-T1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
OS493_038950-T1
OS493_038951-T1
OS493_038952-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_038953-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_038954-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_038955-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_038956-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_038957-T1
OS493_038958-T1
OS493_038959-T1
TOP