About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_038679-T1RIBONUCLEASE P PROTEIN SUBUNIT P38
OS493_038680-T1AAA-FAMILY ATPASE
OS493_038681-T1TUBULIN
OS493_038682-T1TUBULIN
OS493_038683-T1TUBULIN
OS493_038684-T1
OS493_038685-T1
OS493_038686-T1
OS493_038687-T1
OS493_038688-T1
OS493_038689-T1
OS493_038690-T1BASIGIN RELATED
OS493_038691-T1
OS493_038692-T1SLR5058 PROTEIN
OS493_038693-T1
OS493_038694-T1
OS493_038695-T1
OS493_038697-T1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
OS493_038699-T1
OS493_038700-T1
OS493_038701-T1
OS493_038702-T1BASIGIN RELATED
OS493_038704-T1
OS493_038705-T1
OS493_038706-T1
OS493_038707-T1
OS493_038708-T1
OS493_038709-T1UBIQUITIN-LIKE PROTEASE 4-RELATED
OS493_038710-T1
OS493_038711-T1
OS493_038712-T1
OS493_038713-T1
OS493_038714-T1
OS493_038715-T1
OS493_038717-T1-
OS493_038718-T1
OS493_038719-T1
OS493_038720-T1SI:DKEY-29D5.2
OS493_038721-T1
OS493_038722-T1
OS493_038723-T1
OS493_038724-T1
OS493_038725-T1
OS493_038726-T1G-PROTEIN COUPLED RECEPTOR
OS493_038727-T1G-PROTEIN COUPLED RECEPTOR
OS493_038728-T1
OS493_038729-T1MEDIATOR COMPLEX SUBUNIT
OS493_038730-T1MEDIATOR COMPLEX SUBUNIT
OS493_038731-T1
OS493_038732-T1FACIOGENITAL DYSPLASIA PROTEIN
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