About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_038733-T1
OS493_038734-T1AIG1-TYPE G DOMAIN-CONTAINING PROTEIN
OS493_038735-T1AIG1-TYPE G DOMAIN-CONTAINING PROTEIN
OS493_038736-T1
OS493_038737-T1
OS493_038738-T1
OS493_038739-T1SLR5058 PROTEIN
OS493_038740-T1
OS493_038742-T1REGULATOR-RELATED
OS493_038743-T1REGULATOR-RELATED
OS493_038744-T1PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8
OS493_038745-T1
OS493_038746-T1
OS493_038747-T1UNCHARACTERIZED
OS493_038748-T1
OS493_038749-T1UNCHARACTERIZED
OS493_038750-T1
OS493_038751-T1
OS493_038752-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_038753-T1
OS493_038754-T1
OS493_038755-T1
OS493_038756-T1
OS493_038757-T1PENTRAXIN
OS493_038758-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
OS493_038759-T1
OS493_038760-T1CAVEOLIN
OS493_038761-T1
OS493_038762-T1
OS493_038764-T1GASTROKINE 1
OS493_038765-T1INTEGRAL TRANSMEMBRANE PROTEIN 2
OS493_038766-T1
OS493_038767-T1NUCLEAR-INTERACTING PARTNER OF ALK
OS493_038769-T1DIVALENT CATION TRANSPORTER SOLUTE CARRIER FAMILY 41
OS493_038770-T1UNCHARACTERIZED
OS493_038771-T1
OS493_038772-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_038773-T1
OS493_038774-T1
OS493_038775-T1
OS493_038776-T1
OS493_038777-T1
OS493_038778-T1GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN
OS493_038779-T1GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN
OS493_038780-T1GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN
OS493_038781-T1
OS493_038782-T1
OS493_038783-T1
OS493_038784-T1
OS493_038785-T1
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