About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_039561-T1
OS493_039562-T1
OS493_039563-T1UNCHARACTERIZED
OS493_039564-T1ARYLSULFATASE
OS493_039565-T1ARYLSULFATASE
OS493_039566-T1
OS493_039567-T1TYROSINE-PROTEIN KINASE BAZ1B
OS493_039568-T1
OS493_039569-T1BITESIZE, ISOFORM I
OS493_039570-T1BITESIZE, ISOFORM I
OS493_039571-T1NUCLEAR PORE COMPLEX PROTEIN NUP160
OS493_039572-T1
OS493_039573-T1
OS493_039574-T1
OS493_039575-T1VILLIN
OS493_039576-T1-
OS493_039577-T1
OS493_039578-T1
OS493_039579-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_039580-T1
OS493_039581-T1
OS493_039583-T1REGULATOR OF CHROMOSOME CONDENSATION
OS493_039585-T1PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
OS493_039586-T1E3 UFM1-PROTEIN LIGASE 1
OS493_039588-T1
OS493_039589-T1
OS493_039590-T1POTASSIUM CHANNEL, SUBFAMILY K
OS493_039592-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
OS493_039593-T1
OS493_039594-T1
OS493_039595-T1
OS493_039596-T1UNCHARACTERIZED
OS493_039597-T1
OS493_039598-T1
OS493_039599-T1
OS493_039600-T1
OS493_039601-T1
OS493_039602-T1AVIDIN-RELATED
OS493_039603-T1
OS493_039604-T1KATANIN P80 SUBUNIT
OS493_039605-T1PROTEIN PHOSPHATASE INHIBITOR
OS493_039606-T1
OS493_039607-T1CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
OS493_039609-T1
OS493_039610-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_039611-T1TYROSINE-PROTEIN KINASE
OS493_039612-T1
OS493_039613-T1
OS493_039614-T1
OS493_039615-T1
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