Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7996018.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7996020.1 | |
| CAI7996030.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7996028.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7996032.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7996026.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7996024.1 | |
| CAI7996022.1 | |
| CAI7996036.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7996034.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7996038.1 | |
| CAI7996040.1 | |
| CAI7996042.1 | |
| CAI7996045.1 | |
| CAI7996047.1 | |
| CAI7996051.1 | |
| CAI7996049.1 | |
| CAI7996062.1 | |
| CAI7996064.1 | |
| CAI7996066.1 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
| CAI7996068.1 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
| CAI7996070.1 | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED |
| CAI7996074.1 | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED |
| CAI7996072.1 | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED |
| CAI7996076.1 | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED |
| CAI7996078.1 | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED |
| CAI7996080.1 | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED |
| CAI7996084.1 | ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE |
| CAI7996082.1 | ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE |
| CAI7996086.1 | ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE |
| CAI7996088.1 | ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE |
| CAI7996090.1 | UNCHARACTERIZED |
| CAI7996092.1 | DPH3 HOMOLOG-RELATED |
| CAI7996097.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI7996099.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI7996101.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI7996103.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI7996105.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI7996107.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI7996109.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI7996116.1 | FURRY-RELATED |
| CAI7996118.1 | FRG1 PROTEIN |
| CAI7996120.1 | INORGANIC PYROPHOSPHATASE |
| CAI7996124.1 | RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR |
| CAI7996122.1 | RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR |
| CAI7996126.1 | BROAD-RANGE ACID PHOSPHATASE DET1 |
| CAI7996128.1 | PHOSPHATIDYLINOSITOL KINASE |
| CAI7996136.1 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| CAI7996134.1 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| CAI7996130.1 | RHO GUANINE EXCHANGE FACTOR-RELATED |
