Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7996290.1 | |
| CAI7996292.1 | |
| CAI7996296.1 | |
| CAI7996294.1 | |
| CAI7996298.1 | |
| CAI7996300.1 | |
| CAI7996302.1 | |
| CAI7996304.1 | |
| CAI7996306.1 | |
| CAI7996312.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI7996310.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI7996308.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI7996314.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI7996316.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI7996318.1 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 15 |
| CAI7996320.1 | SH3 DOMAIN-CONTAINING |
| CAI7996334.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996332.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996326.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996330.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996328.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996324.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996322.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996336.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996338.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996340.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996342.1 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
| CAI7996344.1 | |
| CAI7996348.1 | FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE |
| CAI7996346.1 | FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE |
| CAI7996350.1 | UNCHARACTERIZED |
| CAI7996352.1 | POLY ADP-RIBOSE GLYCOHYDROLASE |
| CAI7996354.1 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| CAI7996356.1 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| CAI7996358.1 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| CAI7996360.1 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| CAI7996362.1 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
| CAI7996364.1 | |
| CAI7996366.1 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
| CAI7996370.1 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
| CAI7996368.1 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
| CAI7996372.1 | |
| CAI7996374.1 | |
| CAI7996376.1 | |
| CAI7996378.1 | |
| CAI7996382.1 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
| CAI7996380.1 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
| CAI7996384.1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| CAI7996386.1 | |
| CAI7996388.1 |
