About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034616-T1
LLU|FUN_034617-T1-
LLU|FUN_034618-T1
LLU|FUN_034619-T1
LLU|FUN_034620-T1
LLU|FUN_034621-T1
LLU|FUN_034622-T1
LLU|FUN_034623-T1
LLU|FUN_034624-T1UNCHARACTERIZED
LLU|FUN_034625-T1PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
LLU|FUN_034626-T1
LLU|FUN_034627-T1
LLU|FUN_034628-T1
LLU|FUN_034629-T1
LLU|FUN_034630-T1
LLU|FUN_034631-T1
LLU|FUN_034632-T1EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
LLU|FUN_034633-T1SELENOPROTEIN O
LLU|FUN_034634-T1GATA ZINC FINGER DOMAIN-CONTAINING
LLU|FUN_034635-T1FI19922P1-RELATED
LLU|FUN_034636-T1
LLU|FUN_034637-T1TETRASPANIN
LLU|FUN_034638-T1
LLU|FUN_034639-T1
LLU|FUN_034640-T1
LLU|FUN_034641-T1
LLU|FUN_034642-T1
LLU|FUN_034643-T1TRANSMEMBRANE PROTEIN 199
LLU|FUN_034644-T1
LLU|FUN_034645-T1SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT
LLU|FUN_034646-T1LEUCINE ZIPPER CONTAINING TRANSCRIPTION FACTOR LZF1
LLU|FUN_034647-T1PROLINE OXIDASE
LLU|FUN_034648-T1
LLU|FUN_034649-T1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22
LLU|FUN_034650-T1F-BOX ONLY PROTEIN 3
LLU|FUN_034651-T1PHOSPHATIDYLSERINE DECARBOXYLASE
LLU|FUN_034652-T1PROTEIN ANKUB1
LLU|FUN_034653-T1PHOSPHOGLYCERATE MUTASE-RELATED
LLU|FUN_034654-T1
LLU|FUN_034655-T1BETA TRANSDUCIN-RELATED PROTEIN
LLU|FUN_034656-T1WD40 REPEAT PROTEIN
LLU|FUN_034657-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_034658-T1
LLU|FUN_034659-T1
LLU|FUN_034660-T1
LLU|FUN_034661-T1
LLU|FUN_034662-T1
LLU|FUN_034663-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_034664-T1
LLU|FUN_034665-T1
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