About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034413-T1HOMEOBOX PROTEIN NKX
LLU|FUN_034414-T1
LLU|FUN_034415-T1
LLU|FUN_034416-T1IP01054P
LLU|FUN_034419-T1
LLU|FUN_034420-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_034421-T1
LLU|FUN_034423-T1
LLU|FUN_034424-T1TRANSCRIPTION FACTOR LBX
LLU|FUN_034425-T1
LLU|FUN_034426-T1
LLU|FUN_034427-T1
LLU|FUN_034428-T1TCF3 FUSION PARTNER
LLU|FUN_034429-T1
LLU|FUN_034430-T1
LLU|FUN_034431-T1
LLU|FUN_034432-T1
LLU|FUN_034433-T1
LLU|FUN_034434-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_034435-T1
LLU|FUN_034436-T1HUEL-CATION TRANSPORTER
LLU|FUN_034437-T1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B
LLU|FUN_034438-T1
LLU|FUN_034439-T1PROTEIN FAM181B
LLU|FUN_034440-T1
LLU|FUN_034441-T1FCH AND DOUBLE SH3 DOMAINS PROTEIN
LLU|FUN_034442-T1
LLU|FUN_034443-T1
LLU|FUN_034444-T1
LLU|FUN_034445-T1PHD FINGER PROTEINS
LLU|FUN_034446-T1
LLU|FUN_034447-T1
LLU|FUN_034448-T1
LLU|FUN_034449-T1ARGININE OR CREATINE KINASE
LLU|FUN_034450-T1ARGININE OR CREATINE KINASE
LLU|FUN_034451-T1ARGININE OR CREATINE KINASE
LLU|FUN_034452-T1VILLIN
LLU|FUN_034453-T1
LLU|FUN_034454-T1
LLU|FUN_034455-T1
LLU|FUN_034456-T1
LLU|FUN_034457-T1
LLU|FUN_034458-T1
LLU|FUN_034459-T1
LLU|FUN_034460-T1ZINC FINGER PROTEIN 142
LLU|FUN_034461-T1PREFOLDIN SUBUNIT 5
LLU|FUN_034462-T1LOC100145250 PROTEIN
LLU|FUN_034463-T1LOC100145250 PROTEIN
LLU|FUN_034464-T1
LLU|FUN_034465-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
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