About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034137-T1
LLU|FUN_034138-T1
LLU|FUN_034139-T1
LLU|FUN_034140-T1
LLU|FUN_034141-T1
LLU|FUN_034142-T1
LLU|FUN_034143-T1
LLU|FUN_034144-T1
LLU|FUN_034145-T1
LLU|FUN_034146-T1SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED
LLU|FUN_034147-T1CLEAVAGE STIMULATION FACTOR SUBUNIT 1
LLU|FUN_034148-T1COPINE FAMILY PROTEIN 1
LLU|FUN_034149-T1DNA REPAIR/RNA PROCESSING CPSF FAMILY
LLU|FUN_034150-T1
LLU|FUN_034151-T1
LLU|FUN_034152-T1BACTERIOHEMERYTHRIN
LLU|FUN_034153-T1
LLU|FUN_034166-T1BACTERIOHEMERYTHRIN
LLU|FUN_034167-T1
LLU|FUN_034168-T1BACTERIOHEMERYTHRIN
LLU|FUN_034172-T1
LLU|FUN_034173-T1
LLU|FUN_034174-T1
LLU|FUN_034175-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 62-RELATED
LLU|FUN_034176-T1F1C9.34 PROTEIN
LLU|FUN_034177-T1PROTEIN C7ORF21
LLU|FUN_034178-T1VACUOLAR ATP SYNTHASE SUBUNIT F
LLU|FUN_034179-T1STEROL DESATURASE
LLU|FUN_034180-T1
LLU|FUN_034181-T1
LLU|FUN_034182-T1
LLU|FUN_034183-T1
LLU|FUN_034184-T1
LLU|FUN_034185-T1
LLU|FUN_034186-T1
LLU|FUN_034187-T1
LLU|FUN_034188-T1
LLU|FUN_034189-T1
LLU|FUN_034190-T1
LLU|FUN_034191-T1
LLU|FUN_034192-T1ZINC FINGER PROTEIN
LLU|FUN_034193-T1
LLU|FUN_034194-T1RNA RECOGNITION RRM/RNP DOMAIN
LLU|FUN_034195-T1AAA-FAMILY ATPASE
LLU|FUN_034196-T1RNA RECOGNITION RRM/RNP DOMAIN
LLU|FUN_034197-T1NUDIX HYDROLASE RELATED
LLU|FUN_034198-T1FIBROBLAST GROWTH FACTOR
LLU|FUN_034199-T1
LLU|FUN_034200-T1
LLU|FUN_034201-T1
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