About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033937-T1CENTROSOMAL PROTEIN OF 170 KDA
LLU|FUN_033938-T1
LLU|FUN_033939-T1ROLLING PEBBLES, ISOFORM B
LLU|FUN_033940-T1POTE ANKYRIN DOMAIN
LLU|FUN_033941-T1ANKYRIN REPEAT PROTEIN
LLU|FUN_033942-T1PRE-MRNA-SPLICING FACTOR ISY1
LLU|FUN_033943-T1
LLU|FUN_033944-T1
LLU|FUN_033945-T1GLYCOPROTEIN HORMONE BETA CHAIN
LLU|FUN_033946-T1
LLU|FUN_033947-T1HRAS-LIKE SUPPRESSOR - RELATED
LLU|FUN_033948-T1PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4
LLU|FUN_033949-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_033950-T1
LLU|FUN_033951-T1CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
LLU|FUN_033952-T1
LLU|FUN_033953-T1
LLU|FUN_033954-T1
LLU|FUN_033955-T1
LLU|FUN_033956-T1
LLU|FUN_033957-T1
LLU|FUN_033958-T1
LLU|FUN_033959-T1
LLU|FUN_033960-T1HOMEOBOX PROTEIN
LLU|FUN_033961-T1
LLU|FUN_033962-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_033963-T1ADP-DEPENDENT GLUCOKINASE
LLU|FUN_033964-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_033965-T1
LLU|FUN_033966-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_033967-T1
LLU|FUN_033968-T1HEMOGLOBINASE FAMILY MEMBER
LLU|FUN_033969-T1
LLU|FUN_033970-T1HEMOGLOBINASE FAMILY MEMBER
LLU|FUN_033971-T1HEMOGLOBINASE FAMILY MEMBER
LLU|FUN_033972-T1HEMOGLOBINASE FAMILY MEMBER
LLU|FUN_033973-T1
LLU|FUN_033974-T1HEMOGLOBINASE FAMILY MEMBER
LLU|FUN_033975-T1
LLU|FUN_033976-T1ISTHMIN-2
LLU|FUN_033977-T1
LLU|FUN_033978-T1ALDOSE-1-EPIMERASE
LLU|FUN_033979-T1MATRIN 3/NUCLEAR PROTEIN 220-RELATED
LLU|FUN_033980-T1
LLU|FUN_033981-T1UNCHARACTERIZED
LLU|FUN_033982-T1TUBULIN POLYGLUTAMYLASE
LLU|FUN_033983-T1
LLU|FUN_033984-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_033985-T1
LLU|FUN_033986-T1PIKACHURIN-LIKE PROTEIN
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