About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033730-T1HOMOGENTISATE 1,2-DIOXYGENASE
LLU|FUN_033731-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
LLU|FUN_033732-T1ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_033733-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
LLU|FUN_033734-T1
LLU|FUN_033735-T1
LLU|FUN_033736-T1SOLUTE CARRIER FAMILY 40 MEMBER
LLU|FUN_033737-T1SOLUTE CARRIER FAMILY 40 MEMBER
LLU|FUN_033738-T1
LLU|FUN_033739-T1SLL0310 PROTEIN
LLU|FUN_033740-T1
LLU|FUN_033741-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
LLU|FUN_033742-T1
LLU|FUN_033743-T1
LLU|FUN_033744-T1CULLIN
LLU|FUN_033745-T1PREFOLDIN SUBUNIT 3
LLU|FUN_033746-T1ASSOCIATE OF C-MYC AMY-1
LLU|FUN_033747-T1
LLU|FUN_033748-T1BETA1,3-GALACTOSYLTRANSFERASE
LLU|FUN_033749-T1
LLU|FUN_033750-T1CENTROSOMAL PROTEIN 2
LLU|FUN_033751-T1
LLU|FUN_033752-T1TRICHOHYALIN-RELATED
LLU|FUN_033753-T1
LLU|FUN_033754-T1
LLU|FUN_033755-T1
LLU|FUN_033756-T1
LLU|FUN_033757-T1
LLU|FUN_033758-T1PROTEIN CBG05131
LLU|FUN_033759-T1PERICENTRIN-LIKE PROTEIN, ISOFORM F
LLU|FUN_033760-T1
LLU|FUN_033761-T1
LLU|FUN_033762-T1
LLU|FUN_033763-T1
LLU|FUN_033764-T1
LLU|FUN_033765-T1
LLU|FUN_033766-T1
LLU|FUN_033767-T1PDZ AND LIM DOMAIN PROTEIN ZASP
LLU|FUN_033768-T1PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR
LLU|FUN_033769-T1
LLU|FUN_033770-T1
LLU|FUN_033771-T1PDZ AND LIM DOMAIN PROTEIN ZASP
LLU|FUN_033772-T1THYMUS, BRAIN AND TESTES-ASSOCIATED
LLU|FUN_033773-T1TRNA (GUANINE-9-) METHYLTRANSFERASE
LLU|FUN_033774-T1MICROSOMAL TRIGLYCERIDE TRANSFER PROTEIN, LARGE SUBUNIT
LLU|FUN_033775-T1E3 UBIQUITIN-PROTEIN LIGASE RAD18
LLU|FUN_033776-T1POLY ADP-RIBOSE GLYCOHYDROLASE
LLU|FUN_033777-T1
LLU|FUN_033778-T1
LLU|FUN_033779-T1
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