About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033630-T1RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED
LLU|FUN_033631-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
LLU|FUN_033632-T1
LLU|FUN_033633-T1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
LLU|FUN_033634-T1
LLU|FUN_033635-T1
LLU|FUN_033636-T1VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28
LLU|FUN_033637-T1CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
LLU|FUN_033638-T1CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
LLU|FUN_033639-T1UPF0573 PROTEIN C2ORF70
LLU|FUN_033640-T1LD30288P
LLU|FUN_033641-T1SELENOPROTEIN P
LLU|FUN_033642-T1ACETYLCHOLINESTERASE
LLU|FUN_033643-T1
LLU|FUN_033644-T1
LLU|FUN_033645-T1
LLU|FUN_033646-T1
LLU|FUN_033647-T1
LLU|FUN_033648-T1CORTICOTROPIN-RELEASING FACTOR-BINDING PROTEIN
LLU|FUN_033649-T1GUANYLYL CYCLASE
LLU|FUN_033650-T1
LLU|FUN_033651-T1GUANYLYL CYCLASE
LLU|FUN_033652-T1
LLU|FUN_033653-T1
LLU|FUN_033654-T1SMALL INTEGRAL MEMBRANE PROTEIN 15
LLU|FUN_033655-T1
LLU|FUN_033656-T1
LLU|FUN_033657-T1
LLU|FUN_033658-T1
LLU|FUN_033659-T1MUCIN 4-RELATED
LLU|FUN_033660-T1
LLU|FUN_033661-T1
LLU|FUN_033662-T1
LLU|FUN_033663-T1
LLU|FUN_033664-T1
LLU|FUN_033665-T1
LLU|FUN_033666-T1
LLU|FUN_033667-T1
LLU|FUN_033668-T1
LLU|FUN_033669-T1
LLU|FUN_033670-T1
LLU|FUN_033671-T1
LLU|FUN_033672-T1DEOXYRIBONUCLEASE II
LLU|FUN_033673-T1
LLU|FUN_033674-T1
LLU|FUN_033675-T1
LLU|FUN_033676-T1
LLU|FUN_033677-T1
LLU|FUN_033678-T1
LLU|FUN_033679-T1
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