About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033680-T1
LLU|FUN_033681-T1
LLU|FUN_033682-T1
LLU|FUN_033683-T1
LLU|FUN_033684-T1
LLU|FUN_033685-T1
LLU|FUN_033686-T1
LLU|FUN_033687-T1
LLU|FUN_033688-T1
LLU|FUN_033689-T1
LLU|FUN_033690-T1
LLU|FUN_033691-T1
LLU|FUN_033692-T1
LLU|FUN_033693-T1
LLU|FUN_033694-T1
LLU|FUN_033695-T1
LLU|FUN_033696-T1
LLU|FUN_033697-T1
LLU|FUN_033698-T1
LLU|FUN_033699-T1
LLU|FUN_033700-T1
LLU|FUN_033701-T1
LLU|FUN_033702-T1UBIQUITIN THIOESTERASE
LLU|FUN_033703-T1LANC-LIKE PROTEIN
LLU|FUN_033704-T1SPINAL CORD EXPRESSION PROTEIN 4
LLU|FUN_033705-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
LLU|FUN_033706-T150S RIBOSOMAL PROTEIN L21
LLU|FUN_033707-T1STEERIN
LLU|FUN_033708-T1STEERIN
LLU|FUN_033709-T1STEERIN
LLU|FUN_033710-T1
LLU|FUN_033711-T1
LLU|FUN_033712-T1
LLU|FUN_033713-T1TRANSCRIPTION FACTOR E2F
LLU|FUN_033714-T1
LLU|FUN_033715-T1
LLU|FUN_033716-T1METHYLOSOME PROTEIN 50
LLU|FUN_033717-T1EBNA2 BINDING PROTEIN P100
LLU|FUN_033718-T1GEO07735P1-RELATED-RELATED
LLU|FUN_033719-T1
LLU|FUN_033720-T1
LLU|FUN_033721-T1BETA-1,4-GALACTOSYLTRANSFERASE
LLU|FUN_033722-T1
LLU|FUN_033723-T1
LLU|FUN_033724-T1BETA-1,4-GALACTOSYLTRANSFERASE
LLU|FUN_033725-T1BETA-1,4-GALACTOSYLTRANSFERASE
LLU|FUN_033726-T1HL07962P-RELATED
LLU|FUN_033727-T1POLYPHOSPHOINOSITIDE PHOSPHATASE
LLU|FUN_033728-T1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14
LLU|FUN_033729-T1HOMOGENTISATE 1,2-DIOXYGENASE
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