About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034087-T1COLLAGEN ALPHA
LLU|FUN_034088-T1COLLAGEN ALPHA
LLU|FUN_034089-T1
LLU|FUN_034090-T1
LLU|FUN_034091-T1
LLU|FUN_034092-T1
LLU|FUN_034093-T1
LLU|FUN_034094-T1E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER
LLU|FUN_034095-T1
LLU|FUN_034096-T1BTK-BINDING PROTEIN-RELATED
LLU|FUN_034097-T1-
LLU|FUN_034098-T1BTK-BINDING PROTEIN-RELATED
LLU|FUN_034099-T1
LLU|FUN_034100-T1E3 UBIQUITIN-PROTEIN LIGASE HECTD3
LLU|FUN_034101-T1
LLU|FUN_034102-T1
LLU|FUN_034103-T1
LLU|FUN_034104-T1
LLU|FUN_034105-T1
LLU|FUN_034106-T1
LLU|FUN_034107-T1
LLU|FUN_034108-T1
LLU|FUN_034109-T1HOMEOBOX PROTEIN NKX
LLU|FUN_034110-T1
LLU|FUN_034111-T1
LLU|FUN_034112-T1
LLU|FUN_034113-T1
LLU|FUN_034114-T1BLR2807 PROTEIN
LLU|FUN_034115-T1
LLU|FUN_034116-T1
LLU|FUN_034117-T1
LLU|FUN_034118-T1LEUCINE ZIPPER PROTEIN 4-RELATED
LLU|FUN_034119-T1
LLU|FUN_034120-T1
LLU|FUN_034121-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
LLU|FUN_034122-T1
LLU|FUN_034123-T1
LLU|FUN_034124-T1
LLU|FUN_034125-T1
LLU|FUN_034126-T1
LLU|FUN_034127-T1
LLU|FUN_034128-T1
LLU|FUN_034129-T1
LLU|FUN_034130-T1
LLU|FUN_034131-T1UNCHARACTERIZED
LLU|FUN_034132-T1
LLU|FUN_034133-T1
LLU|FUN_034134-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_034135-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_034136-T1
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