About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034302-T1
LLU|FUN_034303-T1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
LLU|FUN_034304-T1
LLU|FUN_034305-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_034306-T1SUGAR NUCLEOTIDE EPIMERASE RELATED
LLU|FUN_034307-T1ADAPTIN, ALPHA/GAMMA/EPSILON
LLU|FUN_034308-T1
LLU|FUN_034309-T1
LLU|FUN_034310-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_034311-T1
LLU|FUN_034312-T1
LLU|FUN_034313-T1FURRY-RELATED
LLU|FUN_034314-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_034315-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
LLU|FUN_034316-T1
LLU|FUN_034317-T1CADHERIN-87A
LLU|FUN_034318-T1
LLU|FUN_034319-T1CADHERIN-87A
LLU|FUN_034320-T1
LLU|FUN_034321-T1
LLU|FUN_034322-T1
LLU|FUN_034323-T1
LLU|FUN_034324-T1
LLU|FUN_034325-T1HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_034326-T1
LLU|FUN_034327-T1
LLU|FUN_034328-T1CRUMBS FAMILY MEMBER
LLU|FUN_034329-T1UPF0705 PROTEIN C11ORF49
LLU|FUN_034330-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_034331-T1BLR2807 PROTEIN
LLU|FUN_034332-T1
LLU|FUN_034333-T1BLR2807 PROTEIN
LLU|FUN_034334-T1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
LLU|FUN_034335-T1
LLU|FUN_034336-T1
LLU|FUN_034337-T1
LLU|FUN_034338-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_034339-T1
LLU|FUN_034340-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_034341-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_034342-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_034343-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_034344-T1
LLU|FUN_034345-T1
LLU|FUN_034346-T1
LLU|FUN_034347-T1
LLU|FUN_034348-T1TMEM26 PROTEIN
LLU|FUN_034349-T1TMEM26 PROTEIN
LLU|FUN_034350-T1IMPACT-RELATED
LLU|FUN_034351-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
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