About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034516-T1BONUS, ISOFORM C-RELATED
LLU|FUN_034517-T1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
LLU|FUN_034518-T1ZINC FINGER PROTEIN 207
LLU|FUN_034519-T1CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
LLU|FUN_034520-T1
LLU|FUN_034521-T1
LLU|FUN_034522-T1
LLU|FUN_034523-T1
LLU|FUN_034524-T1SERINE/THREONINE-PROTEIN KINASE SBK1
LLU|FUN_034525-T1
LLU|FUN_034526-T1
LLU|FUN_034527-T1TGF-BETA FAMILY
LLU|FUN_034528-T1TGF-BETA FAMILY
LLU|FUN_034529-T1PENTRAXIN
LLU|FUN_034530-T1
LLU|FUN_034531-T1ADHESION G-PROTEIN COUPLED RECEPTOR
LLU|FUN_034532-T1
LLU|FUN_034533-T1AGAP007109-PA
LLU|FUN_034534-T1
LLU|FUN_034535-T1
LLU|FUN_034536-T1
LLU|FUN_034537-T1
LLU|FUN_034538-T1
LLU|FUN_034539-T1
LLU|FUN_034540-T1
LLU|FUN_034541-T1NISCHARIN RELATED
LLU|FUN_034542-T1
LLU|FUN_034543-T1
LLU|FUN_034544-T1
LLU|FUN_034545-T1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
LLU|FUN_034546-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 299
LLU|FUN_034547-T1
LLU|FUN_034548-T1
LLU|FUN_034549-T1
LLU|FUN_034550-T1TGF-BETA FAMILY
LLU|FUN_034551-T1TGF-BETA FAMILY
LLU|FUN_034552-T1APYRASE
LLU|FUN_034553-T1RNA-BINDING PROTEIN LUC7-RELATED
LLU|FUN_034554-T1TRANSLATION FACTOR
LLU|FUN_034555-T1
LLU|FUN_034556-T1DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER
LLU|FUN_034557-T1UNCHARACTERIZED
LLU|FUN_034558-T1UNCHARACTERIZED
LLU|FUN_034559-T1HEPARAN SULFATE SULFOTRANSFERASE
LLU|FUN_034560-T1
LLU|FUN_034561-T1HEPARAN SULFATE SULFOTRANSFERASE
LLU|FUN_034562-T1
LLU|FUN_034563-T1
LLU|FUN_034564-T1
LLU|FUN_034565-T1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
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