About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034666-T1
LLU|FUN_034667-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_034668-T1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
LLU|FUN_034669-T1
LLU|FUN_034670-T1KICSTOR COMPLEX PROTEIN C12ORF66
LLU|FUN_034671-T1KICSTOR COMPLEX PROTEIN C12ORF66
LLU|FUN_034672-T1
LLU|FUN_034673-T1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
LLU|FUN_034674-T1
LLU|FUN_034675-T1HYR DOMAIN-CONTAINING PROTEIN
LLU|FUN_034676-T1
LLU|FUN_034677-T1
LLU|FUN_034678-T1HYR DOMAIN-CONTAINING PROTEIN
LLU|FUN_034679-T1
LLU|FUN_034680-T1
LLU|FUN_034681-T1
LLU|FUN_034682-T1
LLU|FUN_034683-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_034684-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_034685-T1
LLU|FUN_034686-T1AGAP008648-PA
LLU|FUN_034687-T1
LLU|FUN_034688-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_034689-T1
LLU|FUN_034690-T1
LLU|FUN_034691-T1MEDIATOR COMPLEX SUBUNIT
LLU|FUN_034692-T1
LLU|FUN_034693-T1
LLU|FUN_034694-T1PROTEIN CBG24663
LLU|FUN_034695-T1PEROXYUREIDOACRYLATE/UREIDOACRYLATE AMIDOHYDROLASE-RELATED
LLU|FUN_034696-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_034697-T1
LLU|FUN_034698-T1
LLU|FUN_034699-T1
LLU|FUN_034700-T1CS DOMAIN-CONTAINING PROTEIN
LLU|FUN_034701-T1
LLU|FUN_034702-T1
LLU|FUN_034703-T1INTIMAL THICKNESS RECEPTOR-RELATED
LLU|FUN_034704-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_034705-T1SLEI FAMILY PROTEIN
LLU|FUN_034706-T1
LLU|FUN_034707-T1
LLU|FUN_034708-T1G-PROTEIN COUPLED RECEPTOR 89-RELATED
LLU|FUN_034709-T1SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT
LLU|FUN_034710-T1HISTONE H4 TRANSCRIPTION FACTOR-RELATED
LLU|FUN_034711-T1UNCHARACTERIZED
LLU|FUN_034712-T1UNCHARACTERIZED
LLU|FUN_034713-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_034714-T1
LLU|FUN_034715-T1LEUCOKININ RECEPTOR-RELATED
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