About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_034716-T1
LLU|FUN_034717-T1MEMBRANE PROTEIN CH1 RELATED
LLU|FUN_034718-T1SI:CH211-262H13.3-RELATED-RELATED
LLU|FUN_034719-T1
LLU|FUN_034720-T1
LLU|FUN_034721-T1
LLU|FUN_034722-T1
LLU|FUN_034723-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
LLU|FUN_034724-T1
LLU|FUN_034725-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_034726-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_034727-T1DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER
LLU|FUN_034728-T1WD REPEAT DOMAIN 9
LLU|FUN_034729-T1AP ENDONUCLEASE
LLU|FUN_034730-T1DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
LLU|FUN_034731-T1COILED COIL DOMAIN-CONTAINING PROTEIN 8, CCDC8
LLU|FUN_034733-T1
LLU|FUN_034734-T1PYRROLINE-5-CARBOXYLATE REDUCTASE
LLU|FUN_034735-T1XAP-5 PROTEIN-RELATED
LLU|FUN_034736-T1PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN
LLU|FUN_034737-T1
LLU|FUN_034738-T1YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN
LLU|FUN_034739-T1
LLU|FUN_034740-T1
LLU|FUN_034741-T1
LLU|FUN_034742-T1
LLU|FUN_034743-T1
LLU|FUN_034744-T1
LLU|FUN_034745-T1GLYCOGEN SYNTHASE
LLU|FUN_034746-T1LIPASE MATURATION FACTOR
LLU|FUN_034747-T1CONDENSIN-2 COMPLEX SUBUNIT H2
LLU|FUN_034748-T1DED DOMAIN-CONTAINING PROTEIN
LLU|FUN_034749-T1DED DOMAIN-CONTAINING PROTEIN
LLU|FUN_034750-T1
LLU|FUN_034751-T1
LLU|FUN_034752-T1DED DOMAIN-CONTAINING PROTEIN
LLU|FUN_034753-T1
LLU|FUN_034755-T1DED DOMAIN-CONTAINING PROTEIN
LLU|FUN_034756-T1
LLU|FUN_034757-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_034758-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_034759-T1
LLU|FUN_034760-T1
LLU|FUN_034761-T1
LLU|FUN_034762-T1
LLU|FUN_034763-T1
LLU|FUN_034764-T1
LLU|FUN_034765-T1
LLU|FUN_034766-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_034767-T1SOLUTE CARRIER FAMILY 35
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