About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_035690-T1
OS493_035691-T1LIPOXYGENASE
OS493_035692-T1LIPOXYGENASE
OS493_035694-T1ATP-DEPENDENT DNA HELICASE
OS493_035695-T1
OS493_035696-T1
OS493_035697-T1C. ELEGANS HOMEOBOX
OS493_035698-T1
OS493_035699-T1
OS493_035700-T1
OS493_035701-T1
OS493_035702-T1
OS493_035703-T1
OS493_035704-T1CABRIOLET.-RELATED
OS493_035705-T1
OS493_035706-T1
OS493_035707-T1
OS493_035708-T1
OS493_035709-T1
OS493_035710-T1
OS493_035711-T1
OS493_035712-T1
OS493_035713-T1
OS493_035714-T1
OS493_035715-T1HOMEOBOX PROTEIN ARISTALESS
OS493_035717-T1RAS-LIKE FAMILY MEMBER 11
OS493_035718-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_035720-T1
OS493_035721-T1
OS493_035722-T1
OS493_035723-T1
OS493_035724-T1BASIGIN RELATED
OS493_035725-T1
OS493_035726-T1
OS493_035727-T1
OS493_035728-T1
OS493_035730-T1BASIGIN RELATED
OS493_035733-T1EXPRESSED PROTEIN
OS493_035734-T1
OS493_035735-T1
OS493_035736-T1
OS493_035738-T1
OS493_035739-T1
OS493_035740-T1
OS493_035741-T1
OS493_035743-T1
OS493_035744-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_035746-T1SOLUTE CARRIER FAMILY 35
OS493_035747-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_035748-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
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