About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_035362-T1MALEYLACETOACETATE ISOMERASE
OS493_035365-T1
OS493_035368-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_035371-T1
OS493_035372-T1
OS493_035373-T1
OS493_035374-T1
OS493_035375-T1
OS493_035376-T1
OS493_035377-T1
OS493_035378-T1CAMK FAMILY PROTEIN KINASE
OS493_035379-T1
OS493_035380-T1
OS493_035381-T1CAMK FAMILY PROTEIN KINASE
OS493_035382-T1CAMK FAMILY PROTEIN KINASE
OS493_035383-T1SULFATE TRANSPORTER
OS493_035384-T1
OS493_035385-T1SULFATE TRANSPORTER
OS493_035386-T1SULFATE TRANSPORTER
OS493_035387-T1
OS493_035389-T1
OS493_035390-T1
OS493_035391-T1
OS493_035392-T1
OS493_035393-T1
OS493_035394-T1
OS493_035395-T1
OS493_035396-T1
OS493_035397-T1
OS493_035398-T1
OS493_035399-T1
OS493_035400-T1ALPHA-MANNOSIDASE 2C1
OS493_035401-T1ALPHA-MANNOSIDASE 2C1
OS493_035402-T1LEUCOKININ RECEPTOR-RELATED
OS493_035403-T1LEUCOKININ RECEPTOR-RELATED
OS493_035404-T1LEUCOKININ RECEPTOR-RELATED
OS493_035405-T1
OS493_035406-T1LEUCOKININ RECEPTOR-RELATED
OS493_035407-T1
OS493_035408-T1SERINE/THREONINE-PROTEIN KINASE
OS493_035409-T1SERINE/THREONINE-PROTEIN KINASE
OS493_035410-T1
OS493_035411-T1
OS493_035412-T1
OS493_035413-T1
OS493_035414-T1SPERMIDINE/SPERMINE SYNTHASE
OS493_035415-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
OS493_035417-T1
OS493_035418-T1
OS493_035419-T1
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