About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 649 650 651 652 653 654 655 656 657 658 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_014093-T1POLYCOMB GROUP PROTEIN
OS493_014094-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_014095-T1-
OS493_014096-T1PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
OS493_014097-T1PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
OS493_014098-T1NETRIN/LAMININ-RELATED
OS493_014099-T1CONTACTIN 5
OS493_014100-T1CONTACTIN 5
OS493_014101-T1NEPHRIN
OS493_014102-T1CONTACTIN 5
OS493_014103-T1PIKACHURIN-LIKE PROTEIN
OS493_014104-T1-
OS493_014105-T1-
OS493_014107-T1TRIOSEPHOSPHATE ISOMERASE
OS493_014108-T1-
OS493_014109-T1COPPER AMINE OXIDASE
OS493_014110-T1-
OS493_014111-T1PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
OS493_014112-T1UNCHARACTERIZED
OS493_014113-T1-
TOP