About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_035194-T1VACUOLAR MEMBRANE PROTEIN YPL162C
OS493_035197-T1MIX-TYPE HOMEOBOX GENE 1-RELATED
OS493_035198-T1MIX-TYPE HOMEOBOX GENE 1-RELATED
OS493_035199-T1
OS493_035200-T1
OS493_035201-T1
OS493_035202-T1
OS493_035203-T1
OS493_035204-T1
OS493_035205-T1VACUOLAR MEMBRANE PROTEIN YPL162C
OS493_035206-T1HOMEOBOX PROTEIN ARISTALESS
OS493_035207-T1
OS493_035208-T1
OS493_035209-T1SORTILIN RELATED
OS493_035210-T1GAMMA TUBULIN COMPLEX PROTEIN
OS493_035211-T1
OS493_035212-T1
OS493_035213-T1GAMMA TUBULIN COMPLEX PROTEIN
OS493_035214-T1GAMMA TUBULIN COMPLEX PROTEIN
OS493_035215-T1
OS493_035216-T1
OS493_035217-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_035218-T1
OS493_035219-T1
OS493_035220-T1
OS493_035221-T1GAMMA TUBULIN COMPLEX PROTEIN
OS493_035222-T1
OS493_035223-T1GAMMA TUBULIN COMPLEX PROTEIN
OS493_035224-T1
OS493_035225-T1
OS493_035226-T1
OS493_035227-T1
OS493_035228-T1SERINE-THREONINE PROTEIN KINASE
OS493_035229-T1
OS493_035230-T1
OS493_035231-T1
OS493_035232-T1
OS493_035233-T1PROTEIN G1-LIKE2
OS493_035234-T1SERINE-THREONINE PROTEIN KINASE
OS493_035235-T1
OS493_035236-T1PHAGE INTEGRASE-RELATED
OS493_035237-T1
OS493_035238-T1CCHC-TYPE DOMAIN-CONTAINING PROTEIN
OS493_035239-T1
OS493_035240-T1
OS493_035241-T1
OS493_035242-T1
OS493_035243-T1
OS493_035244-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_035245-T1
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