About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_035246-T1
OS493_035247-T1PROTEIN CBG23806
OS493_035248-T1PROTEIN CBG23806
OS493_035249-T1F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
OS493_035250-T1
OS493_035253-T1
OS493_035254-T1
OS493_035255-T1
OS493_035256-T1
OS493_035257-T1
OS493_035258-T1F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
OS493_035259-T1
OS493_035260-T1
OS493_035261-T1
OS493_035262-T1
OS493_035263-T1
OS493_035264-T1OVOCHYMASE-RELATED
OS493_035266-T1
OS493_035267-T1CHROMOSOME 20 ORF85 FAMILY MEMBER
OS493_035269-T1
OS493_035270-T1
OS493_035271-T1CHROMOSOME 20 ORF85 FAMILY MEMBER
OS493_035272-T1
OS493_035273-T1
OS493_035276-T1
OS493_035277-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_035278-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_035279-T1NXPE FAMILY MEMBER
OS493_035280-T1-
OS493_035282-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_035283-T1
OS493_035284-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_035285-T1
OS493_035286-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_035288-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_035289-T1NXPE FAMILY MEMBER
OS493_035290-T1-
OS493_035291-T1
OS493_035292-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_035293-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_035294-T1-
OS493_035295-T1
OS493_035296-T1
OS493_035297-T1LEUCOKININ RECEPTOR-RELATED
OS493_035298-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_035300-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_035301-T1LEUCOKININ RECEPTOR-RELATED
OS493_035302-T1RIBOSOME BIOGENESIS PROTEIN
OS493_035303-T1RIBOSOME BIOGENESIS PROTEIN
OS493_035304-T1RIBOSOME BIOGENESIS PROTEIN
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