About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 640 641 642 643 644 645 646 647 648 649 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_034848-T1
OS493_034851-T1UBIQUITIN
OS493_034852-T1
OS493_034853-T1
OS493_034854-T1
OS493_034855-T1
OS493_034857-T1
OS493_034858-T1MONOACYLGLYCEROL LIPASE
OS493_034859-T1MONOACYLGLYCEROL LIPASE
OS493_034860-T1
OS493_034862-T1ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
OS493_034863-T1BECLIN 1
OS493_034864-T1BECLIN 1
OS493_034865-T1PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
OS493_034866-T1PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
OS493_034867-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 51
OS493_034870-T1
OS493_034872-T1
OS493_034873-T1
OS493_034875-T1
OS493_034876-T1
OS493_034877-T1
OS493_034878-T1DESMOGLEIN FAMILY MEMBER
OS493_034879-T1CADHERIN-23
OS493_034880-T1
OS493_034881-T1CADHERIN-23
OS493_034882-T1
OS493_034883-T1
OS493_034884-T1POLYCYSTIN FAMILY MEMBER
OS493_034885-T1POLYCYSTIN FAMILY MEMBER
OS493_034886-T1POLYCYSTIN FAMILY MEMBER
OS493_034887-T1POLYCYSTIN FAMILY MEMBER
OS493_034888-T1
OS493_034889-T1POLYCYSTIN-1
OS493_034890-T1
OS493_034891-T1
OS493_034892-T1
OS493_034893-T1RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED
OS493_034894-T1
OS493_034895-T1
OS493_034896-T1ZINC FINGER PROTEIN 183
OS493_034897-T1
OS493_034898-T1PROTEIN GAMETE EXPRESSED 1
OS493_034899-T1CULTURE SPECIFIC PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G00130)-RELATED
OS493_034900-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
OS493_034901-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
OS493_034902-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
OS493_034903-T1
OS493_034904-T1
OS493_034906-T1
TOP